Taqman protein assay in Title/Summary

TaqMan Protein Software

The TaqMan Protein Assays product family is comprised of a simple, 1-step sample prep kit for preparing cell lysates, 6 pre-designed assays for detecting human protein markers, a supporting core reagents kit, and 2 control cell lysate kits. Four of the assays detect the human stem cell pluripotency markers hNANOG, hOCT3/4, hSOX2, and hLIN28.

• Publisher: Life Technologies
• Home page: products.appliedbiosystems.com
• Last updated: November 5th, 2010

TaqMan Genotyper Software

TaqMan Genotyper Software is a free SNP genotyping data analysis tool for use with TaqMan SNP Genotyping Assays (Pre-Designed, Custom and DME) in combination with 48-, 96- and 384-well microtiter plates, and OpenArray Genotyping Plates. It gives you the option of using user-definable boundaries for data analysis or an improved algorithmic approach to automatically assign a genotype.

• Publisher: Life Technologies Corporation
• Home page: www.lifetechnologies.com
• Last updated: November 24th, 2010

CLC Protein Workbench

CLC Protein Workbench creates a software environment enabling users to make a large number of advanced protein sequence analyses, combined with smooth data management, and excellent graphical viewing and output options. CLC Protein Workbench includes the following features:Protein sequence analysis, Database searches, Pattern search and Project and data management.

• Publisher: CLC bio
• Home page: www.clcbio.com
• Last updated: April 18th, 2012

Taqman protein assay in Description

NanoDrop 1000

The Thermo Scientific NanoDrop 1000 Spectrophotometer measures 1 ul samples with high accuracy and reproducibility. The full spectrum (220nm-750nm) spectrophotometer utilizes a patented sample retention technology that employs surface tension alone to hold the sample in place. This eliminates the need for cumbersome cuvettes and other sample containment devices and allows for clean up in seconds.

• Publisher: Thermo Fisher Scientific
• Home page: www.nanodrop.com
• Last updated: December 19th, 2011

MutationDetector

Applied Biosystems Mutation Detector™ Software is an automated data analysis tool that performs mutation detection analysis of real-time PCR quantitation data from TaqMan® Mutation Detection Assay research experiments. View and analyze data for multiple experiments simultaneously.

• Publisher: Applied Biosystems
• Home page: www.appliedbiosystems.com
• Last updated: April 16th, 2013

Modeller

Modeller 9v7

• Publisher: Andrej Sali Lab, UCSF
• Home page: salilab.org
• Last updated: July 6th, 2010

Bruker Daltonics BioTools

As a central component in the proteomics-related hardware and software suite from Bruker Daltonics, BioTools™ provides an unprecedented support to mass spectrometry-based proteomics and protein analysis. BioTools is designed for the interpretation of MS and MS/MS spectra of protein digests or peptides obtained with the full range of Bruker Daltonics ESI and MALDI instruments.

• Publisher: Bruker Daltonik GmbH
• Last updated: June 16th, 2012

SEQMOL-Kd

SEQMOL can be used to align multiple protein and DNA sequences, compute evolutionary attributes of multiple sequence alignments (such as sequence conservation, hydrophobicity conservation, conformational flexibility conservation, physical covariation, protein-protein interface, protein-RNA interface and protein-DNA interface propensity, and conservations) and to map these features onto PDB files.

• Publisher: BiochemLabSolutions
• Home page: biochemlabsolutions.com
• Last updated: February 23rd, 2015

Additional Taqman protein assay selection

CopyCaller

CopyCaller Software performs relative quantitation analysis of genomic DNA targets using the real-time PCR data from pre-designed or Custom TaqMan Copy Number Assay experiments. The software and associated copy number assays can be used to detect and measure copy number variation of specific sequences in the human genome.

• Publisher: Applied Biosystems
• Last updated: July 29th, 2013

Protein Purification

Protein Purification is a computer program that simulates the protein purification process. It starts off by letting you examine how a simple mixture of proteins behaves during gel filtration and ion-exchange chromatography and then goes on to allow the design and testing of full purification protocols using more complex mixtures of proteins.

• Publisher: Andrew Booth
• Last updated: November 20th, 2015

STRAP- Multiple Protein Alignments

With this free Java software you can: - Use latest bioinformatics tools with an intuitive user interface - Compare proteins by sequence and 3D-similarity - Search protein databases - Publish protein alignments online - Use STRAP to view results of bioinformatics services

• Publisher: Christoph Gille Charite, Institute for Biochemistry
• Home page: www.bioinformatics.org
• Last updated: February 22nd, 2012

EGAN WebStart

EGAN provides comprehensive, automated calculation of meta-data coincidence (over-representation, enrichment) for user- and assay-defined gene lists, and provides direct links to web resources and literature (NCBI Entrez Gene, PubMed, KEGG, Gene Ontology, iHOP, Google, etc.).

• Publisher: UCSF Helen Diller Family Comprehensive Cancer Center Biostatistics and Computational Biology Core
• Last updated: May 22nd, 2012

Cn3D

Cn3D (to be read "see in 3D") is an application offered as support for web browsers so that one can view 3D structures from the NCBI Entrez Structure database. Cn3D permits the simultaneous display of structure, sequence and alignment of bio-molecules. The utility can make appropriate correlations between structure and sequence information.

• Publisher: NCBI
• Home page: www.ncbi.nlm.nih.gov
• Last updated: June 6th, 2011

Geneious

Geneious is a research tool designed for biologists and not computer scientists. Main features: - Drag and drop to convert and import sequence data. - Powerful SNP detection and variant calling. - Streamlined microsatellite genotyping. - Tree building and viewing without juggling files. - Add your favourite algorithm, database or visualization to Geneious.

• Publisher: Biomatters Ltd.
• Last updated: December 4th, 2018

CambridgeSoft BioAssay

BioAssay it is designed for chemists and biologists working on pharmaceutical, drug or gene research and is of particular value for researchers performing in vivo experiments with complex models. Integrate chemical and biological data. Query by structure or text with ChemFinder and set up Excel templates for reporting and graphing. BioAssay is available for the Windows platform only.

• Publisher: CambridgeSoft Corporation
• Last updated: August 8th, 2009

FastPCR

FastPCR is a software tool, mostly designed for professionals, that facilitates the designing of PCR primers for standard, long-distance, multiplex PCR, inverse, or real-time PCR. By using this app, users can handle long sequences and sets of nucleic acid or protein sequences.

• Publisher: Primer Digital Ltd.
• Last updated: April 26th, 2021

OLIGO

OLIGO Primer Analysis Software is the essential tool for designing and analyzing sequencing and PCR primers, synthetic genes. Besides that it's also used for various kinds of probes including siRNA and molecular beacons. Multiple file batch processing is possible.

• Publisher: Molecular Biology Insights, Inc.
• Home page: www.oligo.net
• Last updated: November 12th, 2015

CLC Sequence Viewer

CLC Sequence Viewer features Full integration of data input, data management, calculations results, and data export. This eliminates time spent on manual data transfers between different programs and databases, all types of files can be saved in local projects and launched from the program, etc.

• Publisher: QIAGEN
• Last updated: November 23rd, 2017